{
  "_id": "6a50c02289c83ec243a30455",
  "Package": "pro",
  "Type": "Package",
  "Title": "Point-Process Response Model for Optogenetics",
  "Version": "0.1.1",
  "Date": "2015-09-17",
  "Author": "Xi (Rossi) LUO with contributions from Dylan Small and Vikaas\nSohal",
  "Maintainer": "Xi (Rossi) LUO <xi.rossi.luo@gmail.com>",
  "Description": "Optogenetics is a new tool to study neuronal circuits that\nhave been genetically modified to allow stimulation by flashes\nof light.  This package implements the methodological\nframework, Point-process Response model for Optogenetics (PRO),\nfor analyzing data from these experiments.  This method\nprovides explicit nonlinear transformations to link the flash\npoint-process with the spiking point-process.  Such response\nfunctions can be used to provide important and interpretable\nscientific insights into the properties of the biophysical\nprocess that governs neural spiking in response to optogenetic\nstimulation.",
  "License": "GPL-2",
  "Repository": "https://rluo.r-universe.dev",
  "Date/Publication": "2015-09-18 20:00:24 UTC",
  "RemoteUrl": "https://github.com/rluo/pro",
  "RemoteRef": "HEAD",
  "RemoteSha": "8a16db91289e495f67a844cd8592575c5ba0ed81",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-10 09:46:20 UTC",
    "User": "root"
  },
  "_user": "rluo",
  "_type": "src",
  "_file": "pro_0.1.1.tar.gz",
  "_fileid": "https://r2.ropensci.org/64123897b4723172065c1cb456cb99396964ef8e1f8a40e92fb3a107c4f859f1",
  "_filesize": 84987,
  "_sha256": "64123897b4723172065c1cb456cb99396964ef8e1f8a40e92fb3a107c4f859f1",
  "_expires": "2026-10-18T09:49:20.000Z",
  "_created": "2026-07-10T09:46:20.000Z",
  "_published": "2026-07-10T09:49:22.030Z",
  "_jobs": [
    {
      "job": 86333818766,
      "time": 128,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8224055084"
    },
    {
      "job": 86333818710,
      "time": 149,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8224062524"
    },
    {
      "job": 86333818770,
      "time": 105,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8224046348"
    },
    {
      "job": 86333818774,
      "time": 110,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8224048833"
    },
    {
      "job": 86333395857,
      "time": 138,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8224005472"
    },
    {
      "job": 86333818777,
      "time": 84,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8224038717"
    },
    {
      "job": 86333818768,
      "time": 73,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8224034501"
    },
    {
      "job": 86333818775,
      "time": 62,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8224030831"
    },
    {
      "job": 86333818750,
      "time": 67,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8224032259"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910",
  "_status": "success",
  "_upstream": "https://github.com/rluo/pro",
  "_commit": {
    "id": "8a16db91289e495f67a844cd8592575c5ba0ed81",
    "author": "Xi (Rossi) Luo <xi_luo_1@brown.edu>",
    "committer": "Xi (Rossi) Luo <xi_luo_1@brown.edu>",
    "message": "Using R DESCRIPTION for licence\n",
    "time": 1442606424
  },
  "_maintainer": {
    "name": "Xi (Rossi) LUO",
    "email": "xi.rossi.luo@gmail.com",
    "login": "rluo",
    "description": "machine learning, big data, artificial intelligence, causal inference, neuroscience",
    "uuid": 8192512
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "cin",
      "role": "Suggests"
    }
  ],
  "_owner": "rluo",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "rluo",
      "count": 1,
      "uuid": 8192512
    }
  ],
  "_userbio": {
    "uuid": 8192512,
    "type": "user",
    "name": "Xi (Rossi) LUO",
    "followers": 6,
    "description": "machine learning, big data, artificial intelligence, causal inference, neuroscience"
  },
  "_downloads": {
    "count": 143,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/pro"
  },
  "_mentions": 47,
  "_devurl": "https://github.com/rluo/pro",
  "_searchresults": 5,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/pro.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/rluo/pro",
  "_realowner": "rluo",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2015-09-17"
    }
  ],
  "_exports": [
    "model.pro",
    "pro",
    "sim.lif"
  ],
  "_help": [
    {
      "page": "model.pro",
      "title": "Model matrix for point-process responses",
      "topics": [
        "model.pro"
      ]
    },
    {
      "page": "pro",
      "title": "Fit the PRO model",
      "topics": [
        "pro"
      ]
    },
    {
      "page": "sim.lif",
      "title": "Simulate optogenetic stimulation on a leaky-integrate-fire neuron",
      "topics": [
        "sim.lif"
      ]
    }
  ],
  "_rundeps": [],
  "_score": 3,
  "_indexed": true,
  "_nocasepkg": "pro",
  "_universes": [
    "rluo"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-07-10T09:48:32.000Z",
      "distro": "resolute",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/1d00d14b6a394a7ad36dbf8b5dc3d10162d730f5d80c28ecc6a63409da0e32a7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-07-10T09:48:53.000Z",
      "distro": "resolute",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/f00a2f99432d74ce032b35e03aa2850247fb70a9a6f885e7566a75678e1dd1a2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-07-10T09:48:11.000Z",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/01c039b522a2557c9920c14a5a7dd371fb769a0161dec23e80a194f04ed2f024",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-07-10T09:48:15.000Z",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/1a0c5cbc078ad8ba73000319e97e6d8cdf345eddade450f64aec943bd7d4ff3c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-07-10T09:47:58.000Z",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/25c2de2e6c1658e38629db155a408afd9e69f9a68ddfae3c864185c6f1afde5c",
      "status": "success",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-07-10T09:47:35.000Z",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/b2156ae9abf9b21b1eaf8217560090a4105f331e2def48226a411c982ea79aad",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-07-10T09:47:25.000Z",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/b223051014ea7d8a95de058fff37f6bca0f038aecc2c81387757f411a7aaff79",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-07-10T09:47:28.000Z",
      "commit": "8a16db91289e495f67a844cd8592575c5ba0ed81",
      "fileid": "https://r2.ropensci.org/81a44b0f5828ab7bd247cfb4cd5839eef4c5698ea5d038db93181d8dac6c1b2a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rluo/actions/runs/29084017910"
    }
  ]
}